About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35453DAZ-ASSOCIATED PROTEIN 2
Paelopatides35454-
Paelopatides35455ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides35456OS01G0621700 PROTEIN
Paelopatides35457MYOSIN
Paelopatides35458REVERSE TRANSCRIPTASE
Paelopatides35459-
Paelopatides35460EXPRESSED PROTEIN
Paelopatides35461TYROSINE-PROTEIN KINASE
Paelopatides35462-
Paelopatides35463ENZYMATIC POLYPROTEIN-RELATED
Paelopatides35464-
Paelopatides35465-
Paelopatides35466-
Paelopatides35467SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides35468-
Paelopatides35469RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG
Paelopatides35470NHL REPEAT-CONTAINING PROTEIN-RELATED
Paelopatides35471VESICLE PROTEIN SORTING-ASSOCIATED
Paelopatides35472MATRIX METALLOPROTEINASE
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