About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35432-
Paelopatides35433ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
Paelopatides35434SIALIDASE
Paelopatides35435-
Paelopatides35436-
Paelopatides35437SI:CH211-108C17.2-RELATED-RELATED
Paelopatides35438ZGC:195170
Paelopatides35439-
Paelopatides35440-
Paelopatides35441OVOCHYMASE-RELATED
Paelopatides35443CDC42 SMALL EFFECTOR PROTEIN HOMOLOG
Paelopatides35444-
Paelopatides35445SIGNAL PEPTIDE PEPTIDASE
Paelopatides35446SMALL NUCLEAR RIBONUCLEOPROTEIN
Paelopatides35447-
Paelopatides35448MESODERM DEVELOPMENT CANDIDATE 2
Paelopatides35449SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
Paelopatides35450STEROL DESATURASE-RELATED PROTEIN
Paelopatides35451EPM2A-INTERACTING PROTEIN 1
Paelopatides35452REVERSE TRANSCRIPTASES
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