About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35948TYROSINE-PROTEIN KINASE
Paelopatides35949INTELECTIN
Paelopatides35950MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
Paelopatides35951ARYLSULFATASE
Paelopatides35952EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Paelopatides35953FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35954FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35955-
Paelopatides35957CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35958BETA-ALANINE-ACTIVATING ENZYME
Paelopatides35959HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides35961EPM2A-INTERACTING PROTEIN 1
Paelopatides35962DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides35963EPM2A-INTERACTING PROTEIN 1
Paelopatides35964ANOCTAMIN
Paelopatides35965-
Paelopatides35966ANOCTAMIN
Paelopatides35967ANOCTAMIN
Paelopatides35968CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35969ANOCTAMIN
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