About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36383-
Paelopatides36384REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36385HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides36386-
Paelopatides36387-
Paelopatides36388-
Paelopatides36389RETROTRANSPOSON
Paelopatides36390RETROTRANSPOSON
Paelopatides36391CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36392-
Paelopatides36393TRANSPOSASE, PUTATIVE-RELATED
Paelopatides36394-
Paelopatides36395SUPEROXIDE DISMUTASE CU-ZN -RELATED
Paelopatides36396ZINC FINGER PROTEIN 277
Paelopatides36398RNA RECOGNITION MOTIF-CONTAINING
Paelopatides36399SERINE/THREONINE-PROTEIN KINASE
Paelopatides36400DEHYDROGENASE RELATED
Paelopatides36401SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED
Paelopatides36402N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D
Paelopatides36403-
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