About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36362CELL ADHESION MOLECULE
Paelopatides36363-
Paelopatides36364-
Paelopatides36365-
Paelopatides36366-
Paelopatides36367RETROTRANSPOSON
Paelopatides36368PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36369REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36370INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides36371-
Paelopatides36372-
Paelopatides36373-
Paelopatides36374METHYLTRANSFERASE-RELATED
Paelopatides36375ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36376-
Paelopatides36377AMIDOPHOSPHORIBOSYLTRANSFERASE
Paelopatides36379-
Paelopatides36380-
Paelopatides36381ATP-DEPENDENT DNA HELICASE
Paelopatides36382CENTROSOMAL PROTEIN 2
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