About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36425-
Paelopatides36426-
Paelopatides36427REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36428ENDONUCLEASE-RELATED
Paelopatides36429POL PROTEIN
Paelopatides36430RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1
Paelopatides36431AMINOTRANSFERASE CLASS III
Paelopatides36433-
Paelopatides36434ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36435ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36436ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36437ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36438ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36439-
Paelopatides36440PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35
Paelopatides36441NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED
Paelopatides36442RHO FAMILY GTPASE
Paelopatides36443RHO FAMILY GTPASE
Paelopatides36444-
Paelopatides36445LSM1
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