About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36466ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36467ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36468FRIZZLED
Paelopatides36469-
Paelopatides36470CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36471CONTACTIN 5
Paelopatides36472PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Paelopatides36473PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Paelopatides36474ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides36475MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
Paelopatides36476-
Paelopatides36477-
Paelopatides36478POL PROTEIN
Paelopatides36479ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides36480PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides36481-
Paelopatides36482-
Paelopatides36483G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
Paelopatides36484-
Paelopatides36485-
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