About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36688IP13529P
Paelopatides36689SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
Paelopatides36691PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides36692SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED
Paelopatides36693SOMETHING ABOUT SILENCING PROTEIN 10-RELATED
Paelopatides36694PEROXISOME ASSEMBLY PROTEIN 10
Paelopatides36695SUGAR TRANSPORTER
Paelopatides36696SUGAR TRANSPORTER
Paelopatides36697HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides36698NEURALIZED
Paelopatides36699AGAP005574-PA
Paelopatides36700EPM2A-INTERACTING PROTEIN 1
Paelopatides36701DIAMINE N-ACETYLTRANSFERASE
Paelopatides36702DIAMINE N-ACETYLTRANSFERASE
Paelopatides36703DNA-DIRECTED RNA POLYMERASE
Paelopatides36704-
Paelopatides36705POLY ADP-RIBOSE GLYCOHYDROLASE
Paelopatides36706COMPLEMENT FACTOR H-RELATED
Paelopatides36707ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides36708ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
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