About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36608CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36609MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Paelopatides36610REVERSE TRANSCRIPTASES
Paelopatides36611OS05G0310600 PROTEIN
Paelopatides36612CATION-TRANSPORTING ATPASE-RELATED
Paelopatides36613PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36614RETROTRANSPOSON
Paelopatides36615CATION-TRANSPORTING ATPASE-RELATED
Paelopatides36616-
Paelopatides36617PROTEIN CBG26694
Paelopatides36618PROTEIN CBG26694
Paelopatides36619REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36620-
Paelopatides36621PROTEIN CBG26694
Paelopatides36622PROTEIN CBG26694
Paelopatides36623-
Paelopatides36624REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36625-
Paelopatides36626PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED
Paelopatides36627-
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