About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36710-
Paelopatides36711-
Paelopatides36712-
Paelopatides36713THREE PRIME REPAIR EXONUCLEASE 1, 2
Paelopatides36714REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36715UBIQUINONE BIOSYNTHESIS PROTEIN
Paelopatides36716UBIQUINONE BIOSYNTHESIS PROTEIN
Paelopatides36717-
Paelopatides36718-
Paelopatides36719-
Paelopatides36720UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides36721UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides36722CENTROSOMAL PROTEIN OF 70 KDA
Paelopatides36723TUDOR DOMAIN CONTAINING PROTEIN
Paelopatides36724CENTROSOMAL PROTEIN POC5
Paelopatides36725GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Paelopatides3672652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides36727-
Paelopatides36728GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Paelopatides36729PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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