About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36648-
Paelopatides36649PROTEIN CBG26694
Paelopatides36650HEME-BINDING PROTEIN-RELATED
Paelopatides36651-
Paelopatides36652BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides36653UNCHARACTERIZED
Paelopatides36654-
Paelopatides36655REVERSE TRANSCRIPTASE
Paelopatides36656REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36657FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36658-
Paelopatides36659-
Paelopatides36660-
Paelopatides36661ATP-DEPENDENT DNA HELICASE
Paelopatides36662-
Paelopatides36663PROTEIN CBG26694
Paelopatides36664PROTEIN CBG26694
Paelopatides36665ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36666AGAP008228-PA
Paelopatides36667POL PROTEIN
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