About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36811REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36812ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36813PLEXIN
Paelopatides36814PLEXIN
Paelopatides36815-
Paelopatides36816OVOCHYMASE-RELATED
Paelopatides36817EPM2A-INTERACTING PROTEIN 1
Paelopatides36818-
Paelopatides36819DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides36820-
Paelopatides36821RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides36822VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36823VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36824VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36825VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36826-
Paelopatides36827SER/THR PROTEIN KINASE-TRB
Paelopatides36828IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides36829-
Paelopatides36830-
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