About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36851FRUCTOSE-2,6-BISPHOSPHATASE TIGAR
Paelopatides36852-
Paelopatides36853-
Paelopatides36854-
Paelopatides36855DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
Paelopatides36856-
Paelopatides36857ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides36858ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides36859U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11
Paelopatides36860PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides36861PROTEIN FOLDING REGULATOR
Paelopatides368625-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides36863IDURONATE 2-SULFATASE
Paelopatides36864IDURONATE 2-SULFATASE
Paelopatides36865DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
Paelopatides36866-
Paelopatides36867-
Paelopatides36868EPM2A-INTERACTING PROTEIN 1
Paelopatides36869EPM2A-INTERACTING PROTEIN 1
Paelopatides36870DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
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