About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36831REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36832PROTEIN CBG26694
Paelopatides36833-
Paelopatides36834TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
Paelopatides36835GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides36836ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Paelopatides36837ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Paelopatides36838SI:CH211-196P9.1-RELATED
Paelopatides36839REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36840-
Paelopatides36841ARYLACETAMIDE DEACETYLASE
Paelopatides36842AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides36843VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
Paelopatides36844RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F
Paelopatides36845-
Paelopatides36846-
Paelopatides36847MUSCLEBLIND-LIKE PROTEIN
Paelopatides36848-
Paelopatides36849HELICASE RELATED
Paelopatides36850LP10445P
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