About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36891-
Paelopatides36892ZINC FINGER PROTEIN AEBP2
Paelopatides36893REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36894INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG
Paelopatides36895B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides36896L-GULONOLACTONE OXIDASE
Paelopatides36897SYNEMBRYN
Paelopatides36898SYNEMBRYN
Paelopatides36899RETROTRANSPOSON
Paelopatides36900PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36901-
Paelopatides36902SHIPPO-1-RELATED
Paelopatides36903SHIPPO-1-RELATED
Paelopatides36904PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides36905SERINE/THREONINE-PROTEIN KINASE
Paelopatides36906REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36907DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides36908HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
Paelopatides36910-
Paelopatides36911CXC DOMAIN-CONTAINING PROTEIN-RELATED
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