About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36932-
Paelopatides36933-
Paelopatides36935FI04643P-RELATED
Paelopatides36936-
Paelopatides36937NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides36938-
Paelopatides36939-
Paelopatides36941REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36942ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36943MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36944PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides36945FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36946-
Paelopatides36948REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36949-
Paelopatides36950ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36951GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides36952-
Paelopatides36953ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36955FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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