About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36956FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36957FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36958-
Paelopatides36959F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36960-
Paelopatides36961TRANSPOSON
Paelopatides36962POL PROTEIN
Paelopatides36963-
Paelopatides36964REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36965PROTEIN CBG26694
Paelopatides36966PROTEIN CBG26694
Paelopatides36967ADDUCIN
Paelopatides36968-
Paelopatides36969AAA DOMAIN-CONTAINING
Paelopatides36970PROTEIN CBG26694
Paelopatides36971-
Paelopatides36972CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides36973-
Paelopatides36974-
Paelopatides36975ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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