About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37017PROTEIN CBG26694
Paelopatides37018-
Paelopatides37019-
Paelopatides37020PEPTIDASE S8
Paelopatides37021PEPTIDASE S8
Paelopatides37022TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides37023TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides37024-
Paelopatides37025SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides37026TRANSCRIPTION INITIATION FACTOR TFIID
Paelopatides37027ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44
Paelopatides37028UNCHARACTERIZED
Paelopatides37029PROTEIN CBG12474
Paelopatides37030CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B
Paelopatides37031NUCLEAR HORMONE RECEPTOR
Paelopatides37032COILED-COIL DOMAIN-CONTAINING PROTEIN 103
Paelopatides37033COILED-COIL DOMAIN-CONTAINING PROTEIN 103
Paelopatides37034N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides37035E3 UBIQUITIN-PROTEIN LIGASE UBR7
Paelopatides37036-
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