About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37058LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides37059-
Paelopatides37060NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides37061DESUMOYLATING ISOPEPTIDASE
Paelopatides37062-
Paelopatides37063LEUCOKININ RECEPTOR-RELATED
Paelopatides37064REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37065-
Paelopatides37066SI:CH211-108C17.2-RELATED-RELATED
Paelopatides37067ENZYMATIC POLYPROTEIN-RELATED
Paelopatides37068APOLIPOPROTEIN L
Paelopatides37069REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37070MULTICOPPER OXIDASE-RELATED
Paelopatides37071-
Paelopatides37072RAS-LIKE FAMILY MEMBER 11
Paelopatides37073-
Paelopatides37074-
Paelopatides37075REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37076-
Paelopatides37077-
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