About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37078REVERSE TRANSCRIPTASE
Paelopatides37079NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides37080PRENYLTRANSFERASES
Paelopatides37081TRANSPOSON
Paelopatides37082SODIUM/DICARBOXYLATE SYMPORTER-RELATED
Paelopatides37083-
Paelopatides37084MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
Paelopatides37085TRANSDUCIN BETA-LIKE 3
Paelopatides37086CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
Paelopatides37087TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides37088-
Paelopatides37089REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37095EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides37096PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
Paelopatides37097PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
Paelopatides37098UNCHARACTERIZED
Paelopatides37099REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37100REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37101-
Paelopatides37102-
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