About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37146-
Paelopatides37147REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37148CYTOKINE RECEPTOR
Paelopatides37149-
Paelopatides37150IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Paelopatides37151ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides37152REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37153SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides37154AGAP008170-PA
Paelopatides37155MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides37156-
Paelopatides37157TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
Paelopatides37158PROHIBITIN
Paelopatides37159LUPUS LA PROTEIN-RELATED
Paelopatides37160EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides37161-
Paelopatides37162-
Paelopatides37163-
Paelopatides37164ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides37165-
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