About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37361MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
Paelopatides37362DNA REPAIR PROTEIN XRCC2
Paelopatides37363THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED
Paelopatides37364THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED
Paelopatides37365RIIA DOMAIN-CONTAINING PROTEIN 1
Paelopatides37366CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69
Paelopatides37367CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69
Paelopatides37368B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides37369ACTIN
Paelopatides37370-
Paelopatides37371REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37372-
Paelopatides37373GUANINE NUCLEOTIDE EXCHANGE FACTOR
Paelopatides37374-
Paelopatides37375-
Paelopatides37376UNCHARACTERIZED
Paelopatides37377UNCHARACTERIZED
Paelopatides37378EPM2A-INTERACTING PROTEIN 1
Paelopatides37379CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides37380NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A
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