About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37316MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides37317SERINE/THREONINE-PROTEIN KINASE
Paelopatides37318ADP RIBOSYLATION FACTOR-RELATED
Paelopatides37319UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides37320NUCLEAR-INTERACTING PARTNER OF ALK
Paelopatides37321-
Paelopatides37322ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides37323-
Paelopatides37324AGAP008228-PA
Paelopatides37325SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN
Paelopatides37326-
Paelopatides37327RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides37328RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides37333-
Paelopatides37334-
Paelopatides37335CYCLINS
Paelopatides37336CYTOCHROME B561-RELATED
Paelopatides37337CYTOCHROME B561-RELATED
Paelopatides37338CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37339EPM2A-INTERACTING PROTEIN 1
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