About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37273RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides37274RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides37275ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides37276-
Paelopatides37280MULTICOPPER OXIDASE-RELATED
Paelopatides37281PKSB
Paelopatides37282G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides37283CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37284-
Paelopatides37285FI04643P-RELATED
Paelopatides37286PKSB
Paelopatides37287PROTEIN CBG26694
Paelopatides37288ASPARTATE AMINOTRANSFERASE
Paelopatides37289PROTEIN C8ORF37
Paelopatides37290BUCENTAUR RELATED
Paelopatides37291PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides37292-
Paelopatides37293ANNEXIN
Paelopatides37294PROTEIN CBG26694
Paelopatides37295ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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