About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37381FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
Paelopatides37382RETROTRANSPOSON
Paelopatides37383RETROTRANSPOSON
Paelopatides37384ENZYMATIC POLYPROTEIN-RELATED
Paelopatides37385RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides37386PROTEIN CBG26694
Paelopatides37387PROTEIN CBG26694
Paelopatides37388PROTEIN CBG26694
Paelopatides37389-
Paelopatides37390HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides37391SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides37392-
Paelopatides37393-
Paelopatides37395PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Paelopatides37396-
Paelopatides37397ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides37398-
Paelopatides37400-
Paelopatides37401-
Paelopatides37402UNCHARACTERIZED
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