About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37426-
Paelopatides37427-
Paelopatides37428PERIAXIN-LIKE
Paelopatides37429MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
Paelopatides37430ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides37431G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides37432PROTEIN CBG23806
Paelopatides37433PROTEIN CBG23806
Paelopatides37434AGAP008170-PA
Paelopatides37435-
Paelopatides37436OXIDOREDUCTASE HTATIP2
Paelopatides37437TBC1 DOMAIN FAMILY MEMBER 7
Paelopatides37438MONOCARBOXYLATE TRANSPORTER
Paelopatides37439-
Paelopatides37441PHOSPHOLIPID SCRAMBLASE-RELATED
Paelopatides37442-
Paelopatides37443-
Paelopatides37444FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37445FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37446UNCHARACTERIZED
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