About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37447HEDGEHOG
Paelopatides37448-
Paelopatides37449-
Paelopatides37450INTERLEUKIN ENHANCER-BINDING FACTOR
Paelopatides37451REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37452INTERLEUKIN ENHANCER-BINDING FACTOR
Paelopatides37453-
Paelopatides37454-
Paelopatides37455PROTEIN CBG26694
Paelopatides37456PROTEIN CBG26694
Paelopatides37457CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37458CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37459TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides37460FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides37461-
Paelopatides37462-
Paelopatides37463-
Paelopatides37464DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Paelopatides37465DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Paelopatides37466EPM2A-INTERACTING PROTEIN 1
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