About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37527FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37528-
Paelopatides37529-
Paelopatides37530FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37531FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37532G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides37533-
Paelopatides37534-
Paelopatides37535DED DOMAIN-CONTAINING PROTEIN
Paelopatides37536YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides37537-
Paelopatides37538NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides37539-
Paelopatides37540MYB-BINDING PROTEIN 1A FAMILY MEMBER
Paelopatides37541BUCENTAUR RELATED
Paelopatides37542MYB-BINDING PROTEIN 1A FAMILY MEMBER
Paelopatides37543CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides37544-
Paelopatides37545-
Paelopatides37546-
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