About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37547A-KINASE ANCHOR PROTEINS
Paelopatides37548-
Paelopatides37549-
Paelopatides37550-
Paelopatides37551PHOSPHOLIPASE B-RELATED
Paelopatides37552PHOSPHOLIPASE B-RELATED
Paelopatides37553PHOSPHOSERINE PHOSPHATASE
Paelopatides37554GTPASE ERA
Paelopatides37555SPLICING FACTOR 3B SUBUNIT 5
Paelopatides37556STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6
Paelopatides37557SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37558SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37559MRNA EXPORT FACTOR AND BUB3
Paelopatides37560IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides37561MUCIN 4-RELATED
Paelopatides37562HISTONE H4 TRANSCRIPTION FACTOR-RELATED
Paelopatides37563REVERSE TRANSCRIPTASES
Paelopatides37564BUCENTAUR RELATED
Paelopatides37565-
Paelopatides37566PARANEOPLASTIC ANTIGEN
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