About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37507EPM2A-INTERACTING PROTEIN 1
Paelopatides37508-
Paelopatides37509INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides37510PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides37511INTIMAL THICKNESS RECEPTOR-RELATED
Paelopatides37512-
Paelopatides37513-
Paelopatides37514-
Paelopatides37515-
Paelopatides3751652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides37517REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37518PDF RECEPTOR-LIKE PROTEIN-RELATED
Paelopatides37519-
Paelopatides37520PROTEIN CBG26694
Paelopatides37521CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Paelopatides37522-
Paelopatides37523-
Paelopatides37524SPERM-SPECIFIC FAMILY, CLASS Q
Paelopatides37525LORICRIN
Paelopatides37526-
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