About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37649-
Paelopatides37650-
Paelopatides37651-
Paelopatides37652PROTEIN CBG26694
Paelopatides37653ENZYMATIC POLYPROTEIN-RELATED
Paelopatides37654PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides37655PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides37656EXOSOME COMPLEX COMPONENT
Paelopatides37657-
Paelopatides37658LONG-CHAIN-FATTY-ACID--COA LIGASE
Paelopatides37659EG:114D9.1 PROTEIN-RELATED
Paelopatides37660EG:114D9.1 PROTEIN-RELATED
Paelopatides37661ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Paelopatides37662PA-PL1 PHOSPHOLIPASE FAMILY
Paelopatides37663PA-PL1 PHOSPHOLIPASE FAMILY
Paelopatides37664REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37665NIPSNAP-RELATED
Paelopatides37666REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37667-
Paelopatides37668ENDONUCLEASE-RELATED
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