About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37629EG:EG0003.4 PROTEIN-RELATED
Paelopatides37630PROTEIN CBG23806
Paelopatides37631TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides37632RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides37633TRANSCRIPTION TERMINATION FACTOR 2-RELATED
Paelopatides37634TRANSCRIPTION TERMINATION FACTOR 2-RELATED
Paelopatides37635CENTROBIN
Paelopatides37636REGULATOR-RELATED
Paelopatides37637ENDONUCLEASE
Paelopatides37638ENDONUCLEASE
Paelopatides37639C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides37640PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides37641-
Paelopatides37642-
Paelopatides37643-
Paelopatides37644PROTEIN CBG12474
Paelopatides37645ADENYLATE CYCLASE TYPE 1
Paelopatides37646ADENYLATE CYCLASE TYPE 1
Paelopatides37647TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides376485-HYDROXYTRYPTAMINE RECEPTOR
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