About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37833RWD DOMAIN-CONTAINING PROTEIN 3
Paelopatides37834EG:EG0003.4 PROTEIN-RELATED
Paelopatides37835-
Paelopatides37836-
Paelopatides37837NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides37838NETRIN RECEPTOR UNC5
Paelopatides37839PROTEIN CBG26694
Paelopatides37840ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides37841ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides37842CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
Paelopatides37843CELL CYCLE CHECKPOINT PROTEIN RAD17
Paelopatides37844CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37845CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37846-
Paelopatides37847-
Paelopatides37848-
Paelopatides37849SERINE-THREONINE PROTEIN KINASE
Paelopatides37850GAG-RELATED PROTEIN
Paelopatides37851TMEM26 PROTEIN
Paelopatides37852L1 TRANSPOSABLE ELEMENT-RELATED
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