About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37773RING FINGER PROTEIN 37
Paelopatides37774SLIT HOMOLOG
Paelopatides37775CRUMBS FAMILY MEMBER
Paelopatides37776FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37777FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37778-
Paelopatides37779ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides37780ZGC:195170
Paelopatides37781ORGANIC ANION TRANSPORTER
Paelopatides37782-
Paelopatides37783NETRIN RECEPTOR UNC5
Paelopatides37784ZGC:195170
Paelopatides37785-
Paelopatides37786-
Paelopatides37787DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides37788-
Paelopatides37789B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides37790HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides37791-
Paelopatides37792REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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