About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38356PROTEIN CBG26694
Paelopatides38357-
Paelopatides38358JUN TRANSCRIPTION FACTOR-RELATED
Paelopatides38359-
Paelopatides38360PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides38361-
Paelopatides38362RAS GTPASE-ACTIVATING PROTEINS
Paelopatides38363-
Paelopatides38364-
Paelopatides38365PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides38366-
Paelopatides38367-
Paelopatides38368NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Paelopatides38369EXPRESSED PROTEIN
Paelopatides38370-
Paelopatides38371GUANYLYL CYCLASE
Paelopatides38373GUANYLYL CYCLASE
Paelopatides38374-
Paelopatides38375NAD(P) TRANSHYDROGENASE
Paelopatides38376NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
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