About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38234-
Paelopatides38235PRE-MRNA-PROCESSING FACTOR 19
Paelopatides38236PEPTIDASE
Paelopatides38237-
Paelopatides38238CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38239CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38240-
Paelopatides38241PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Paelopatides38242ACETYLCHOLINESTERASE
Paelopatides38243EXPRESSED PROTEIN
Paelopatides38244-
Paelopatides38245-
Paelopatides38246REVERSE TRANSCRIPTASE
Paelopatides38247CYCLINS
Paelopatides38248-
Paelopatides38249ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38250REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38251-
Paelopatides38252ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38253AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
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