About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38417SMAD
Paelopatides38418-
Paelopatides38419FIBRILLIN-RELATED
Paelopatides38420EPM2A-INTERACTING PROTEIN 1
Paelopatides38421MUCIN 4-RELATED
Paelopatides38422LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides38423REPETIN
Paelopatides38424-
Paelopatides38425-
Paelopatides38426-
Paelopatides38427-
Paelopatides38428-
Paelopatides38429DEOXYRIBONUCLEASE
Paelopatides38430L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides38431REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38432EPM2A-INTERACTING PROTEIN 1
Paelopatides38433SOLUTE CARRIER FAMILY 2
Paelopatides38434PROTEIN BARK BEETLE
Paelopatides38435-
Paelopatides38436-
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