About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38397ATAXIN 1
Paelopatides38398TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN
Paelopatides38399-
Paelopatides38400-
Paelopatides38401RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides38402ZGC:195170
Paelopatides38403LYSINE-SPECIFIC DEMETHYLASE
Paelopatides38404TF-1 CELL APOPTOSIS RELATED PROTEIN-15
Paelopatides38405PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides38406RHOMBOID-RELATED PROTEIN
Paelopatides38407-
Paelopatides38408-
Paelopatides38409-
Paelopatides38410-
Paelopatides38411MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides38412-
Paelopatides38413ENDONUCLEASE-RELATED
Paelopatides38414SMAD
Paelopatides38415SMAD
Paelopatides38416PEPTIDASE
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