About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38457KRAB DOMAIN C2H2 ZINC FINGER
Paelopatides38458EPM2A-INTERACTING PROTEIN 1
Paelopatides38459ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides38460-
Paelopatides38464POL PROTEIN
Paelopatides38465ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38466PROTEIN CBG26694
Paelopatides38467PROTEIN CBG26694
Paelopatides38468PROTEIN CBG26694
Paelopatides38469PROTEIN CBG26694
Paelopatides38470-
Paelopatides38471INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides38472ENDONUCLEASE
Paelopatides38473ENDONUCLEASE
Paelopatides38474REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38475CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38476CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38477-
Paelopatides38478EXPRESSED PROTEIN
Paelopatides38479OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
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