About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38437FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides38438PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides38439CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38440RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides38441-
Paelopatides38442REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38443FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides38444TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides38445COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides38446S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides38447-
Paelopatides38448-
Paelopatides38449TRANSCRIPTION INITIATION FACTOR TFIID
Paelopatides38450-
Paelopatides38451-
Paelopatides38452NETRIN RECEPTOR UNC5
Paelopatides38453-
Paelopatides38454PROTEIN TRANSPORT PROTEIN SEC23
Paelopatides38455HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides38456PROTEIN TRANSPORT PROTEIN SEC23
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