About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38583-
Paelopatides38584ZINC FINGER PROTEIN 839
Paelopatides38585-
Paelopatides38586REVERSE TRANSCRIPTASES
Paelopatides38587SYNAPTOTAGMIN 14, ISOFORM D
Paelopatides38588-
Paelopatides38589-
Paelopatides38590REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38591-
Paelopatides38592-
Paelopatides38593CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38594CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38595CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38596SERINE/THREONINE-PROTEIN KINASE
Paelopatides38597BONUS, ISOFORM C-RELATED
Paelopatides38598SRR1-LIKE PROTEIN
Paelopatides38599EXONUCLEASE V
Paelopatides38600MICROTUBULE-ASSOCIATED PROTEIN
Paelopatides38601-
Paelopatides38602PROTEIN MAGO NASHI HOMOLOG
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