About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38624POL PROTEIN
Paelopatides38625POL PROTEIN
Paelopatides38626-
Paelopatides38627-
Paelopatides38628-
Paelopatides38629SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38630SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38631IP01015P-RELATED
Paelopatides38632UNCHARACTERIZED
Paelopatides38633-
Paelopatides38634PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides38635TYROSINE-PROTEIN KINASE
Paelopatides38636-
Paelopatides38637TYROSINE-PROTEIN KINASE
Paelopatides38638-
Paelopatides38639PROTEIN CBG23806
Paelopatides38640-
Paelopatides38641FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides38642HYDROGENASE MATURATION FACTOR HOXX
Paelopatides38643WSCD FAMILY MEMBER CG9164
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