About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38603-
Paelopatides38604REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38605-
Paelopatides38606-
Paelopatides38607ACROSIN-RELATED
Paelopatides38608TRANSPOSON
Paelopatides38609-
Paelopatides38611-
Paelopatides38612WD REPEAT DOMAIN 9
Paelopatides38613WD REPEAT DOMAIN 9
Paelopatides38614POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides38615POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides38616POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides38617WD REPEAT DOMAIN 9
Paelopatides38618DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER
Paelopatides38619AP ENDONUCLEASE
Paelopatides38620TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB
Paelopatides38621-
Paelopatides38622MYOSIN REGULATORY LIGHT CHAIN 2
Paelopatides38623ALPHA- 1,3 -FUCOSYLTRANSFERASE
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