About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38808HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38809HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38810-
Paelopatides38811CGI-41 METHYLTRANSFERASE
Paelopatides38812-
Paelopatides38813-
Paelopatides38814CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38815TYROSINE-PROTEIN KINASE
Paelopatides38816TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides38817TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides38818TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides38819PROTON MYO-INOSITOL COTRANSPORTER
Paelopatides38820PROTON MYO-INOSITOL COTRANSPORTER
Paelopatides38821ARYLSULFATASE FAMILY MEMBER
Paelopatides38822-
Paelopatides38823ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides38824-
Paelopatides38825FCH AND DOUBLE SH3 DOMAINS PROTEIN
Paelopatides38826FCH AND DOUBLE SH3 DOMAINS PROTEIN
Paelopatides38827FCH AND DOUBLE SH3 DOMAINS PROTEIN
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