About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39515TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides39516ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides39517CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides39518NETRIN RECEPTOR UNC5
Paelopatides39519-
Paelopatides39520-
Paelopatides39521-
Paelopatides39522-
Paelopatides39523-
Paelopatides39524INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides39525BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
Paelopatides39526-
Paelopatides39527LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides39528LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides39529-
Paelopatides39530RNA-BINDING PROTEIN RELATED
Paelopatides39531BONUS, ISOFORM C-RELATED
Paelopatides39532UNCHARACTERIZED
Paelopatides39533BUCENTAUR RELATED
Paelopatides39534-
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