About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39495-
Paelopatides39496-
Paelopatides39497SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Paelopatides39498PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides39499RETROTRANSPOSON
Paelopatides39500APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS
Paelopatides39501-
Paelopatides39502CENTROSOMAL PROTEIN OF 89 KDA
Paelopatides39503CENTROSOMAL PROTEIN OF 89 KDA
Paelopatides39504-
Paelopatides39505-
Paelopatides39506-
Paelopatides39507-
Paelopatides39508ENGULFMENT AND CELL MOTILITY
Paelopatides39509-
Paelopatides39510-
Paelopatides39511-
Paelopatides39512PROTEIN CBG26694
Paelopatides39513TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides39514REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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