About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39555L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides39556GAG-RELATED PROTEIN
Paelopatides39559VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides39560NOTCH LIGAND FAMILY MEMBER
Paelopatides39561CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
Paelopatides39562-
Paelopatides39563CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
Paelopatides39564-
Paelopatides39565-
Paelopatides39566SERINE PROTEASE
Paelopatides39567SERINE/ARGININE REPETITIVE MATRIX PROTEIN 5-RELATED
Paelopatides39568-
Paelopatides39569-
Paelopatides39570EPM2A-INTERACTING PROTEIN 1
Paelopatides39571PIKACHURIN-LIKE PROTEIN
Paelopatides39572PIKACHURIN-LIKE PROTEIN
Paelopatides39573-
Paelopatides39574-
Paelopatides39575-
Paelopatides39576-
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