About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39535-
Paelopatides39536ADENYLATE CYCLASE TYPE 1
Paelopatides39537RING FINGER PROTEIN 31-RELATED
Paelopatides39538RING FINGER PROTEIN 31-RELATED
Paelopatides39539IP13529P
Paelopatides39540NETRIN RECEPTOR UNC5
Paelopatides39541NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides39542-
Paelopatides39543NETRIN RECEPTOR UNC5
Paelopatides39544-
Paelopatides39545-
Paelopatides39546-
Paelopatides39547UNCHARACTERIZED
Paelopatides39548PROTEIN CBG26694
Paelopatides39549-
Paelopatides39550-
Paelopatides39551-
Paelopatides39552PROTEIN CBG26694
Paelopatides39553SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides39554AP ENDONUCLEASE
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