About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39887REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39888REVERSE TRANSCRIPTASES
Paelopatides39889NUP107-RELATED
Paelopatides39890CYTOCHROME P450 26
Paelopatides39891URACIL-DNA GLYCOSYLASE
Paelopatides39892EXPRESSED PROTEIN
Paelopatides39893PROTEIN CBG26694
Paelopatides39894PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
Paelopatides39895TETRATRICOPEPTIDE REPEAT PROTEIN 31
Paelopatides39896-
Paelopatides39897-
Paelopatides39898EPOXIDE HYDROLASE
Paelopatides39899CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15
Paelopatides39900-
Paelopatides39901PANTOTHENATE KINASE
Paelopatides39902MAJOR VAULT PROTEIN
Paelopatides39903REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39904MAJOR VAULT PROTEIN
Paelopatides39905MRNA EXPORT FACTOR AND BUB3
Paelopatides39906-
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