About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41103PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides41104RIBOFLAVIN TRANSPORTER RIBJ
Paelopatides41105MONOCARBOXYLATE TRANSPORTER
Paelopatides41106REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41107AQUAPORIN TRANSPORTER
Paelopatides41108ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60
Paelopatides41109-
Paelopatides41110-
Paelopatides41111-
Paelopatides41112PAR-6-RELATED
Paelopatides41113ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides41114-
Paelopatides41118-
Paelopatides41119PROTEIN, PUTATIVE-RELATED
Paelopatides41120FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41121TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides41122FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41123TYROSINE-PROTEIN KINASE
Paelopatides41124-
Paelopatides41125BUCENTAUR RELATED
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